B C D E F G H L M N P R S T U V
seqHMM-package | The seqHMM package |
biofam3c | Three-channel biofam data |
bootstrap_coefs | Bootstrap Sampling of NHMM Coefficients |
bootstrap_coefs.mnhmm | Bootstrap Sampling of NHMM Coefficients |
bootstrap_coefs.nhmm | Bootstrap Sampling of NHMM Coefficients |
build_hmm | Build a Hidden Markov Model |
build_lcm | Build a Latent Class Model |
build_mhmm | Build a Mixture Hidden Markov Model |
build_mm | Build a Markov Model |
build_mmm | Build a Mixture Markov Model |
cluster_names | Get Cluster Names from Mixture HMMs |
cluster_names<- | Set Cluster Names for Mixture Models |
coef.mnhmm | Get the Estimated Regression Coefficients of Non-Homogeneous Hidden Markov Models |
coef.nhmm | Get the Estimated Regression Coefficients of Non-Homogeneous Hidden Markov Models |
colorpalette | Color palettes |
data_to_stslist | Transform TraMineR's state sequence object to data.table and vice versa |
estimate_mnhmm | Estimate a Mixture Non-homogeneous Hidden Markov Model |
estimate_nhmm | Estimate a Non-homogeneous Hidden Markov Model |
fanhmm_leaves | A feedback-augmented non-homogeneuous hidden Markov Model for leaves data |
fit_model | Estimate Parameters of (Mixture) Hidden Markov Models and Their Restricted Variants |
forward_backward | Forward and Backward Probabilities for Hidden Markov Model |
forward_backward.hmm | Forward and Backward Probabilities for Hidden Markov Model |
forward_backward.mhmm | Forward and Backward Probabilities for Hidden Markov Model |
forward_backward.mnhmm | Forward and Backward Probabilities for Hidden Markov Model |
forward_backward.nhmm | Forward and Backward Probabilities for Hidden Markov Model |
get_cluster_probs | Extract the Prior Cluster Probabilities of MHMM or MNHMM |
get_cluster_probs.mhmm | Extract the Prior Cluster Probabilities of MHMM or MNHMM |
get_cluster_probs.mnhmm | Extract the Prior Cluster Probabilities of MHMM or MNHMM |
get_emission_probs | Extract the Emission Probabilities of Hidden Markov Model |
get_emission_probs.hmm | Extract the Emission Probabilities of Hidden Markov Model |
get_emission_probs.mhmm | Extract the Emission Probabilities of Hidden Markov Model |
get_emission_probs.mnhmm | Extract the Emission Probabilities of Hidden Markov Model |
get_emission_probs.nhmm | Extract the Emission Probabilities of Hidden Markov Model |
get_initial_probs | Extract the Initial State Probabilities of Hidden Markov Model |
get_initial_probs.hmm | Extract the Initial State Probabilities of Hidden Markov Model |
get_initial_probs.mhmm | Extract the Initial State Probabilities of Hidden Markov Model |
get_initial_probs.mnhmm | Extract the Initial State Probabilities of Hidden Markov Model |
get_initial_probs.nhmm | Extract the Initial State Probabilities of Hidden Markov Model |
get_marginals | Compute the Marginal Probabilities from NHMMs |
get_transition_probs | Extract the State Transition Probabilities of Hidden Markov Model |
get_transition_probs.hmm | Extract the State Transition Probabilities of Hidden Markov Model |
get_transition_probs.mhmm | Extract the State Transition Probabilities of Hidden Markov Model |
get_transition_probs.mnhmm | Extract the State Transition Probabilities of Hidden Markov Model |
get_transition_probs.nhmm | Extract the State Transition Probabilities of Hidden Markov Model |
gridplot | Plot Multidimensional Sequence Plots in a Grid |
hidden_paths | Most Probable Paths of Hidden States |
hidden_paths.hmm | Most Probable Paths of Hidden States |
hidden_paths.mhmm | Most Probable Paths of Hidden States |
hidden_paths.mnhmm | Most Probable Paths of Hidden States |
hidden_paths.nhmm | Most Probable Paths of Hidden States |
hmm_biofam | Hidden Markov model for the biofam data |
hmm_mvad | Hidden Markov model for the mvad data |
leaves | Synthetic data on fathers' parental leaves in Finland |
logLik.hmm | Log-likelihood of a Hidden Markov Model |
logLik.mhmm | Log-likelihood of a Hidden Markov Model |
logLik.mnhmm | Log-likelihood of a Non-homogeneous Hidden Markov Model |
logLik.nhmm | Log-likelihood of a Non-homogeneous Hidden Markov Model |
mc_to_sc | Transform a Multichannel Hidden Markov Model into a Single Channel Representation |
mc_to_sc_data | Merge Multiple Sequence Objects into One (from Multichannel to Single Channel Data) |
mhmm_biofam | Mixture hidden Markov model for the biofam data |
mhmm_mvad | Mixture hidden Markov model for the mvad data |
most_probable_cluster | Extract Most Probable Cluster for Each Sequence |
mssplot | Interactive Stacked Plots of Multichannel Sequences and/or Most Probable Paths for Mixture Hidden Markov Models |
nobs.hmm | Number of Observations in Hidden Markov Model |
nobs.mhmm | Number of Observations in Hidden Markov Model |
nobs.mnhmm | Number of Observations in Hidden Markov Model |
nobs.nhmm | Number of Observations in Hidden Markov Model |
plot.hmm | Plot hidden Markov models |
plot.mhmm | Interactive Plotting for Mixed Hidden Markov Model (mhmm) |
plot.ssp | Stack Multichannel Sequence Plots and/or Most Probable Paths Plots from Hidden Markov Models |
plot_colors | Plot Colorpalettes |
posterior_cluster_probabilities | Extract Posterior Cluster Probabilities |
posterior_probs | Posterior Probabilities for Hidden Markov Models |
posterior_probs.hmm | Posterior Probabilities for Hidden Markov Models |
posterior_probs.mhmm | Posterior Probabilities for Hidden Markov Models |
posterior_probs.mnhmm | Posterior Probabilities for Hidden Markov Models |
posterior_probs.nhmm | Posterior Probabilities for Hidden Markov Models |
predict.mnhmm | Predictions from Non-homogeneous Hidden Markov Models |
predict.nhmm | Predictions from Non-homogeneous Hidden Markov Models |
print.hmm | Print Method for a Hidden Markov Model |
print.mhmm | Print Method for a Hidden Markov Model |
print.mnhmm | Print Method for a Hidden Markov Model |
print.nhmm | Print Method for a Hidden Markov Model |
print.summary_mhmm | Print Method for a Hidden Markov Model |
return_msg | Convert return code from estimate_nhmm and estimate_mnhmm to text |
separate_mhmm | Reorganize a mixture hidden Markov model to a list of separate hidden Markov models (covariates ignored) |
seqHMM | The seqHMM package |
seqHMM-deprecated | Deprecated function(s) in the seqHMM package |
simulate_emission_probs | Simulate Parameters of Hidden Markov Models |
simulate_hmm | Simulate hidden Markov models |
simulate_initial_probs | Simulate Parameters of Hidden Markov Models |
simulate_mhmm | Simulate Mixture Hidden Markov Models |
simulate_mnhmm | Simulate Mixture Non-homogeneous Hidden Markov Models |
simulate_nhmm | Simulate Non-homogeneous Hidden Markov Models |
simulate_transition_probs | Simulate Parameters of Hidden Markov Models |
sort_sequences | Sort sequences in a sequence object |
ssp | Define Arguments for Plotting Multichannel Sequences and/or Most Probable Paths from Hidden Markov Models |
ssplot | Stacked Plots of Multichannel Sequences and/or Most Probable Paths from Hidden Markov Models |
stacked_sequence_plot | Stacked Sequence Plots of Multichannel Sequences and/or Most Probable Paths from Hidden Markov Models |
state_names | Get State Names of Hidden Markov Model |
state_names.hmm | Get State Names of Hidden Markov Model |
state_names.mhmm | Get State Names of Hidden Markov Model |
state_names.mnhmm | Get State Names of Hidden Markov Model |
state_names.nhmm | Get State Names of Hidden Markov Model |
state_names<- | Get State Names of Hidden Markov Model |
state_names<-.hmm | Get State Names of Hidden Markov Model |
state_names<-.mhmm | Get State Names of Hidden Markov Model |
state_names<-.mnhmm | Get State Names of Hidden Markov Model |
state_names<-.nhmm | Get State Names of Hidden Markov Model |
stslist_to_data | Transform TraMineR's state sequence object to data.table and vice versa |
summary.mhmm | Summary method for mixture hidden Markov models |
summary.mnhmm | Summary method for mixture non-homogenous hidden Markov models |
trim_model | Trim Small Probabilities of Hidden Markov Model |
update.mnhmm | Update Covariate Values of NHMM |
update.nhmm | Update Covariate Values of NHMM |
vcov.mhmm | Variance-Covariance Matrix for Coefficients of Covariates of Mixture Hidden Markov Model |