Deconvolution and Alignment of 1d NMR Spectra


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Documentation for package ‘metabodecon’ version 1.2.6

Help Pages

align Align Spectra
as_decon0 Convert to a Metabodecon Class
as_decon1 Convert to a Metabodecon Class
as_decon2 Convert to a Metabodecon Class
as_decons0 Convert to a Metabodecon Class
as_decons1 Convert to a Metabodecon Class
as_decons2 Convert to a Metabodecon Class
as_idecon Convert to a Metabodecon Class
as_idecons Convert to a Metabodecon Class
as_ispec Convert to a Metabodecon Class
as_ispecs Convert to a Metabodecon Class
as_metabodecon_class Convert to a Metabodecon Class
as_spectra Convert to a Metabodecon Class
as_spectrum Convert to a Metabodecon Class
calculate_lorentz_curves Calculate lorentz curves for each analyzed spectrum
combine_peaks Combine Peaks
convert_pos Convert from unit A to unit B
convert_width Convert from unit A to unit B
datadir Return path to metabodecon's data directory
datadir_persistent Persistent Data Directory
datadir_temp Temporary Data Directory
deconvolute Deconvolute one or more NMR spectra
dohCluster Cluster Based Peak Alignment
download_example_datasets Download metabodecon Example Datasets
draw_spectrum Draw Spectrum
evalwith Evaluate an expression with predefined global state
generate_lorentz_curves Deconvolute one or more NMR spectra
generate_lorentz_curves_sim Deconvolute one or more NMR spectra
gen_feat_mat Generate Feature Matrix.
get_data_dir Retrieve directory path of an example dataset
get_ppm_range Get PPM Range covered by Spectra
is_align Is an Object from a Metabodecon Class?
is_aligns Is an Object from a Metabodecon Class?
is_decon0 Is an Object from a Metabodecon Class?
is_decon1 Is an Object from a Metabodecon Class?
is_decon2 Is an Object from a Metabodecon Class?
is_decons0 Is an Object from a Metabodecon Class?
is_decons1 Is an Object from a Metabodecon Class?
is_decons2 Is an Object from a Metabodecon Class?
is_idecon Is an Object from a Metabodecon Class?
is_idecons Is an Object from a Metabodecon Class?
is_ispec Is an Object from a Metabodecon Class?
is_ispecs Is an Object from a Metabodecon Class?
is_metabodecon_class Is an Object from a Metabodecon Class?
is_spectra Is an Object from a Metabodecon Class?
is_spectrum Is an Object from a Metabodecon Class?
make_spectrum Create a Spectrum Object
MetaboDecon1D Deconvolute 1D NMR spectrum
metabodecon_classes Metabodecon Classes
metabodecon_file Return Path to File or Directory in metabodecon Package
plot_lorentz_curves_save_as_png Plot lorentz curves for variable range
plot_spectra Plot Spectra
plot_spectrum Plot Spectrum
plot_spectrum_superposition_save_as_png Plot spectrum approx for variable range
plot_triplets Plot peak triplets for variable range
print.align S3 Methods for Printing Metabodecon Objects
print.aligns S3 Methods for Printing Metabodecon Objects
print.decon1 S3 Methods for Printing Metabodecon Objects
print.decon2 S3 Methods for Printing Metabodecon Objects
print.decons1 S3 Methods for Printing Metabodecon Objects
print.decons2 S3 Methods for Printing Metabodecon Objects
print.idecon S3 Methods for Printing Metabodecon Objects
print.idecons S3 Methods for Printing Metabodecon Objects
print.ispec S3 Methods for Printing Metabodecon Objects
print.ispecs S3 Methods for Printing Metabodecon Objects
print.spectra S3 Methods for Printing Metabodecon Objects
print.spectrum S3 Methods for Printing Metabodecon Objects
print_methods S3 Methods for Printing Metabodecon Objects
read_spectra Read one or more spectra from Disk
read_spectrum Read one or more spectra from Disk
sap The SAP Dataset
sim The Sim Dataset
simulate_spectrum Simulate a 1D NMR Spectrum
speaq_align Align Signals using 'speaq'
tmpdir Temporary Session Directory
transp Make transparent
tree Print the Structure of a Directory Tree
width Calculate the Width of a Numeric Vector