Identity by Descent Probability in Pedigrees


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Documentation for package ‘ibdsegments’ version 1.0.1

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convolve_total_ibd_dists Convolve IBD distributions to obtain the distribution of the sum
d Probability function for IBD Distribution Objects
d_cibd Probability density of continuously observed IBD segment lengths for pedigree members
d_ibd Compute probability of IBD for pedigree members
E Expectation for IBD Distribution Objects
inheritance_pattern Inheritance pattern for inheritance vectors
inheritance_space Inheritance space for pedigree
multi_ibd_patterns Compute probabilities of minimal multi-id IBD patterns
pr_0_total_ibd Probability of no IBD across one or more chromosomes
pr_all_genes_survive Probability of passing down all autosomal genes to offspring
r_cibd Random generation for IBD on a continuous genome
sd Standard Deviation for IBD Distribution Objects
segment_count_dist Compute probability distribution of IBD segment count
total_ibd_dist Compute probability distribution of total IBD
total_ibd_dist_moments Compute moments of probability distribution of total IBD
var Variance for IBD Distribution Objects