Annotation package for Illumina Infinium DNA methylation probes

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Documentation for package ‘FDb.InfiniumMethylation.hg19’ version 2.2.0

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FDb.InfiniumMethylation.hg19-package Annotation package for Illumina Infinium DNA methylation probes
FDb.InfiniumMethylation.hg19 Annotation package for Illumina Infinium DNA methylation probes
get27k Retrieve annotations for HumanMethylation27 or HumanMethylation450 chips
get450k Retrieve annotations for HumanMethylation27 or HumanMethylation450 chips
getNearest Annotate a group of probes supplied as a GenomicRanges object
getNearestGene Annotate a group of probes supplied as a GenomicRanges object
getNearestTranscript Annotate a group of probes supplied as a GenomicRanges object
getNearestTSS Annotate a group of probes supplied as a GenomicRanges object
getPlatform Retrieve annotations for HumanMethylation27 or HumanMethylation450 chips
hg18ToHg19 miscellaneous data used in the construction of this FeatureDb package
hg19.islands CpG islands found by Wu, Irizarry, and Feinberg via hidden Markov model
hm27.controls miscellaneous data used in the construction of this FeatureDb package
hm27.SNP.colors miscellaneous data used in the construction of this FeatureDb package
hm27ToHg19 Take a GenomicRatioSet or similar annotated to hg18 and reannotate it
hm450.controls miscellaneous data used in the construction of this FeatureDb package
hm450k.rsProbes miscellaneous data used in the construction of this FeatureDb package
lift27kToHg19 Take a GenomicRatioSet or similar annotated to hg18 and reannotate it
seqinfo.hg19 Sequence names, lengths, and circularity for hg19