Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
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Documentation for package ‘MetaPath’ version 1.0
Help Pages
| MetaPath-package | Perform the Meta-Analysis for Pathway Enrichment (MAPE) analysis by combining multiple genomic studies |
| cor.func | internal functions from Dr. Tibshirani's software package GSA |
| cox.perm.sample | internal functions from Dr. Tibshirani's software package GSA |
| coxfunc | internal functions from Dr. Tibshirani's software package GSA |
| coxscor | internal functions from Dr. Tibshirani's software package GSA |
| coxstuff | internal functions from Dr. Tibshirani's software package GSA |
| coxvar | internal functions from Dr. Tibshirani's software package GSA |
| Enrichment_KS_gene | internal functions |
| Enrichment_KS_sample | internal functions |
| F.perm.sample | internal functions |
| MAPE | perform the Meta-Analysis for Pathway Enrichment (MAPE) analysis. |
| MAPE_G_gene_KS | internal functions |
| MAPE_G_sample_KS | internal functions |
| MAPE_I_KS | internal functions |
| MAPE_P_gene_KS | internal functions |
| MAPE_P_sample_KS | internal functions |
| MAQC | The data sets from MAQC project. |
| MetaPath | Perform the Meta-Analysis for Pathway Enrichment (MAPE) analysis by combining multiple genomic studies |
| pathway.DB | An example of pathway database. |
| plotMAPE | Plot MAPE outcomes |
| pqvalues.compute | internal functions |
| reg.perm.sample | internal functions |
| Tperm.sample | internal functions |