Rare Variants Association Analyses with Family Data

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Documentation for package ‘RVFam’ version 1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

RVFam-package	Rare Variants Association Analyses with Family Data
coxph.EC	function for testing a single/pooled variant for survival traits with family data using Cox proportional hazards regression model
coxph.ped	function of single SNP analysis and gene-based tests for survival traits with family data using Cox proportional hazards regression model
gc.fun	function that does genomic control correction to single SNP analysis, sum of square test and RData for survival trait analysis
glmm.binped	function of single SNP analysis and gene-based tests for binary traits with family data using generalized linear mixed effects model
glmm.EC	function for testing a single/pooled variant for continuous traits with family data using generalized linear mixed effects model
lme.EC	function for testing a single/pooled variant for continuous traits with family data using Linear Mixed Effects model
lme.ped	function of single SNP analysis and gene-based tests for continuous traits with family data using Linear Mixed Effects model
rsnpsingene.cor	SNP correlation matrix RData
RVFam	Rare Variants Association Analyses with Family Data
snpinfo	SNP information RData