Statistical analysis for Methylation-sensitive Amplification Polymorphism data


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Documentation for package ‘msap’ version 1.1.8

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rmsap-package Statistical Analyses for Methylation Sensitive Amplification Polymorphism assays
methStatusEval classify a locus as either MSL or NML.
msap Diversity analysis of MSAP data
pcoa Principal Coordinate Analyses
polymorphic Checks polymorphic state
repMet Report methylation levels
shannon Shannon Index of phenotypic diversity