Bayesian Model-Based Clustering of Multi-Modal Data

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Documentation for package ‘mdir’ version 0.9.0

• DESCRIPTION file.

Help Pages

tagmReDraft-package	Semi-supervised Multiple Dataset Integration
calcAllocProb	Calculate allocation probabilities
calcFusionProbabiliy	Calculate fusion probability
calcFusionProbabiliyAllViews	Calculate fusion probability all views
callMDI	Call Multiple Dataset Integration
callMixtureModel	Call mixture model
checkDataCorrectInput	Check data correct input
checkFixedInput	Check fixed input
checkLabels	Check labels
checkNumberOfSamples	Check number of samples
checkTypes	Check types
comparePSMsAcrossChains	Compare Posterior Similarity Matrices Across Chains
compileConsensusClustering	Compile Consensus Clustering
createSimilarityMat	Create Similarity Matrix
findOrder	Find order
gammaLogLikelihood	Gamma log-likelihood
generateGaussianDataset	Generate Gaussian dataset
generateInitialLabels	Generate initial labels
generateInitialSemiSupervisedLabels	Generate initial semi-sueprvised labels
generateInitialUnsupervisedLabels	Generate initial unsupervised labels
generateSimulationDataset	Generate simulation dataset
getLikelihood	Get likelihood
invGammaLogLikelihood	Inverse gamma log-likelihood
invWishartLogLikelihood	Inverse-Wishart log-likelihood
makeCMComparisonSummaryDF	Make CM Comparison Summary DF
mvtLogLikelihood	Multivariate t log-likelihood
plotLikelihoods	Plot likelihoods
pNorm	Multivariate Normal log-likelihood
predictFromMultipleChains	Predict from multiple MCMC chains
prepCMssForGGplot	Prepare consensus matrices for ggplot
prepDataForggHeatmap	Prepare data for ggplot heatmap
prepSimilarityMatricesForGGplot	Prepare similarity matrices for ggplot
processMCMCChain	Process MCMC chain
processMCMCChains	Process MCMC chains
processProposalWindows	Process proposal windows
runMCMCChains	Run MCMC Chains
runMDI	Call Multiple Dataset Integration
sampleStickBreakingPrior	Sample stick breaking prior
sampleViewPriorLabels	Sample view prior labels
setupOutlierComponents	Setup outlier components
stickBreakingPrior	Stick breaking prior
tagmmdiReDraft	Semi-supervised Multiple Dataset Integration
tagmReDraft	Semi-supervised Multiple Dataset Integration
translateTypes	Translate types
wishartLogLikelihood	Wishart log-likelihood